Employee Benefits Compliance Checklist
There seems to be no end to the documentation and requirements necessary to stay within the regs. Big corporations have a full-time staff of specialists to handle all the red tape. But small and medium-sized businesses don’t have that luxury.
That’s why we made this employee benefits compliance checklist—to help small business owners stay on top of benefits compliance and filing compliance and avoid potential penalties.Here are the key things you need to stay on top of as we come to the end of 2025:
1.) File ACA IRS Reporting (Forms 1095-C or 1095-B)
- Who: Applicable Large Employers (ALEs) with 50+ full-time equivalent (FTE) employees.
- Purpose: The ACA mandates that ALEs provide information to the IRS and employees regarding the health coverage offered to full-time employees.
- Requirements: File Form 1095-C for each full-time employee (or Form 1095-B for smaller employers if applicable).
- Deadlines:
- To Employees: January 31, 2025.
- To IRS (Paper Filing): February 28, 2025.
- To IRS (Electronic Filing): April 1, 2025.
- Action: Ensure employee healthcare coverage is accurately reported month by month, including start and end dates. Confirm the filing method (electronic or paper) and ensure all required information is prepared and verified with payroll or HR vendors.
2.) Adjust Salary Withholding to Reflect Affordable Care Act (ACA) Affordability Thresholds
- 2025 Affordability Threshold: For the employer’s coverage to be deemed affordable under ACA, the cost of employee-only coverage should not exceed 9.02% of an employee’s household income. This is an increase from 8.39% in 2025.
- Purpose: Avoid potential penalties for non-compliance with ACA affordability requirements.
- Action: Review the current premium contributions and employee income to confirm compliance with the affordability threshold. You may need to adjust payroll deductions to ensure the health insurance offering meets ACA guidelines.
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3.) Form W-2 Reporting of Health Coverage
- Who: Employers issuing 250+ W-2 forms must report the total cost of employer-sponsored health coverage.
- Purpose: Part of the ACA requirements is to help employees understand the value of their health benefits.
- Due Date: January 31, 2025 (when W-2s are due).
- Requirement: Report the total cost of health coverage in Box 12, Code DD, on employees’ W-2 forms.
- Action: Ensure your payroll provider has accurate healthcare coverage information for 2025. Confirm that Box 12 is completed accurately, reflecting the full cost of employer-sponsored health coverage.
LEARN MORE: Understanding Your HSA Tax Forms
Note: Although businesses with fewer than 50 full-time employees are not subject to the ACA’s employer mandate, small employers are still required to submit certain forms (such as Forms 1095-B and 1095-C if they offer self-funded plans). These forms help employees verify that they have health coverage, especially if they need it for their personal tax filings.
4.) Adjust Contributions to Health Savings Accounts (HSAs) and Flexible Spending Accounts (FSAs) To Reflect New Contribution Limits
If you contribute to employee HSAs or FSAs, you must complete these contributions by December 31st.
Take care that your contributions combined with your employees don’t push your employees over the 2025 limit.
You should also be aware that HSA limits are changing for tax year 2025.
- 2025HSA Limits: $4,150 for individual coverage; $8,300 for family coverage. $1,000 additional catch-up for employees aged 55+.
- 2025 HSA Limits: $4,300 for individual coverage; $8,600 for family coverage.
- 2025 FSA Limits: $3,050 per employee for health FSAs.
- Purpose: Ensure employees are within IRS-approved contribution limits for tax-preferred accounts.
- Action: Inform employees of annual limits. Verify that employee payroll deductions do not exceed allowable amounts for both HSAs and FSAs. Communicate the benefits and any employer contribution changes for the new year.
5.) Adjust 401(k) Contribution Limits and Conduct Nondiscrimination Testing
- 2025 Contribution Limits: $23,000 maximum for employee deferrals; $7,500 additional catch-up for employees aged 50+.
- 2025 Contribution Limits: $23,500 maximum for employee deferrals; $7,500 additional catch-up for employees aged 50+.
- Purpose: Comply with annual nondiscrimination testing (ADP, ACP, and top-heavy tests) to prevent preferential treatment in highly compensated employees’ 401(k) contributions.
- Action: Complete annual nondiscrimination tests by December 31, 2025.
Conduct the “Top Heavy” Test.
A 401(k) plan is considered top-heavy if more than 60% of the total plan assets belong to key employees (officers earning over $215,000 in 2025, employees owning more than 5% of the business, or employees owning more than 1% with compensation over $150,000).
If your plan is top-heavy, you must make a minimum contribution (typically 3% of compensation) to all non-highly-compensated employees (NHCEs) to satisfy IRS requirements.
Conduct the Annual Contribution Percentage (ACP) Test.
The ACP test compares employer-matching contributions and employee after-tax contributions for HCEs and NHCEs.
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- Calculate Each Employee’s Contribution Rate:
- Contribution Rate = (Employer Match + After-Tax Contributions) / Employee’s Compensation
- Determine the Average Contribution Rate for NHCEs:
- Add all NHCEs’ contribution rates and divide by the number of NHCEs.
- Determine the Average Contribution Rate for HCEs:
- Add all HCEs’ contribution rates and divide by the number of HCEs.
- Compare Rates:
- The HCE average contribution rate must not exceed 1.25 times the NHCE average contribution rate.
- Alternatively, the HCE rate can be up to 2% higher than the NHCE rate but cannot be more than 2 times the NHCE rate.
- Calculate Each Employee’s Contribution Rate:
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Address Any Testing Failures.
If the 401(k) plan fails any of the nondiscrimination tests, take corrective action before the end of the testing correction period (usually by the close of the plan year or within 2½ months following the plan year).
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- Corrective Options for ADP/ACP Failures:
- Refund Excess Contributions: Return contributions above the limits to HCEs. These refunds are taxable income for the HCEs in the year of the refund.
- Qualified Nonelective Contributions (QNECs): Make additional contributions to NHCEs to increase their average deferral/contribution rates and bring the plan into compliance.
- Recharacterize Contributions: Recharacterize excess deferrals as after-tax contributions if plan rules allow, which can help meet the test requirements.
- Corrective Options for ADP/ACP Failures:
Important Notes:
- Deadline: Complete nondiscrimination testing by December 31, 2025.
- Corrective Action Period: Ideally, correct testing failures within 2½ months after the close of the plan year to avoid additional penalties and excise taxes.
6.) Complete Your ERISA Summary Annual Report (SAR)
- Who: Employers with ERISA-covered health and welfare plans.
- Purpose: Provide a summary of financial and operational information about the plan to plan participants.
- Due Date: December 15, 2025 (if Form 5500 was filed by July 31, 2025) or September 15 (if an extension for Form 5500 was filed).
- Action: Distribute SAR to all eligible employees by the deadline. Ensure information accurately reflects the financial status of the plan and any material modifications.
7.) Review Compliance with State-Specific Requirements
- Purpose: Compliance with state-mandated employee benefits, including paid leave, health insurance, and other benefits that may vary by state.
- Action: Check state-specific updates for benefits requirements and confirm all benefits comply with state mandates. Update the employee handbook and communicate any changes or new requirements for the upcoming year.
8.) Annual Employee Notices
- Purpose: Ensure compliance with federal notification requirements for all employees regarding their rights and benefits.
- Required Notices:
- Medicare Part D (if offering a prescription drug plan).
- CHIP (Children’s Health Insurance Program).
- WHCRA (Women’s Health and Cancer Rights Act).
- Newborns’ Act.
- Summary of Benefits and Coverage (SBC).
- Action: Distribute all required notices to employees by December 31, 2025. Ensure they are accessible online, especially for remote employees, and include them in open enrollment materials.
9.) Form 5500 for ERISA Plans
- Who: Employers with 100+ participants in an ERISA-covered plan.
- Purpose: Required for ERISA compliance to report the financial condition, investments, and operations of the plan.
- Due Date: July 31, 2025, for calendar-year plans; October 15, 2025, if an extension is filed.
- Action: Verify that all data required for Form 5500 filing is accurate and complete. Plan to file electronically via the EFAST2 system. Maintain copies of all submitted information for plan records.
10.) Review Cafeteria Plan Compliance (Section 125)
- Purpose: Confirm that your Section 125 plan is in compliance, allowing employees to pay for qualified benefits on a pre-tax basis.
- Action: Review the plan document for any 2025 changes and complete annual nondiscrimination testing to ensure no discriminatory impact on highly compensated employees. Communicate any changes to the pre-tax benefit options for the new year.
11.) ACA Minimum Essential Coverage (MEC)
- Purpose: Ensures that the health plan offered by the employer meets MEC standards, which is necessary for compliance and employee qualification for premium tax credits.
- Action: Confirm with your insurance provider that the plan meets MEC requirements. Distribute an updated Summary of Benefits and Coverage (SBC) to employees.
12.) Distribute Summary Plan Description (SPD)
- Who: Employers with ERISA-covered health and welfare benefit plans.
- Purpose: Ensures employees understand the specifics of their benefit plans, including eligibility, coverage, and other critical details.
- Due Date: Within 90 days of an employee’s plan enrollment or within 120 days of a new plan establishment.
- Action: Provide each participant with an SPD and update it if any significant changes were made to the plan in 2025.
13.) COBRA Compliance
- Who: Employers with 20+ employees, subject to COBRA continuation requirements.
- Purpose: Ensure compliance with COBRA by providing employees and their dependents the option to continue group health benefits under qualifying events.
- Action: Verify that termination notices and open enrollment materials include accurate COBRA information. Make sure COBRA notices are provided timely to any qualifying employees.
14.) Review Family and Medical Leave Act (FMLA) Policies
- Who: Employers with 50+ employees must provide eligible employees with up to 12 weeks of unpaid, job-protected leave for specified family and medical reasons.
- Purpose: Compliance with federal FMLA guidelines to avoid penalties and maintain fair leave practices.
- Action: Review the FMLA policy for any 2025 changes. Ensure FMLA leave is tracked correctly and provide eligible employees with timely FMLA notices and information about their rights.
15.) Employee Communication and Open Enrollment
- Purpose: Communicate benefits changes for 2025 to help employees make informed decisions about their coverage options.
- Action: Schedule open enrollment meetings or send resources detailing the new year’s benefits options. Provide support for any questions, and communicate any changes in costs, coverage, or contribution limits for the coming year.
16.) Comply With Flexible Spending Account (FSA) Use-It-Or-Lose-It Rules
Unlike HSAs, Flexible Spending Accounts (FSAs) have a “use-it-or-lose-it” rule, which limits how much unspent FSA money can carry over each year.
Employers can choose one of two options to help employees manage their unused funds:
- Grace Period: Employers may offer a 2.5-month grace period, allowing employees additional time (until March 15) of the following year to use any remaining FSA funds. This option can be especially helpful for employees who may need more time to anticipate and cover out-of-pocket medical expenses.
- Carryover Option: For the 2025 tax year, the IRS has increased the contribution limit for health flexible spending arrangements (FSAs) to $3,300, up from $3,200 in 2025. This adjustment allows employees to set aside more pre-tax dollars for eligible healthcare expenses.
Additionally, some FSA plans offer a carryover option, permitting employees to transfer a portion of unused funds to the following plan year.
The maximum carryover amount is typically 20% of the annual contribution limit, which would be $660 for 2025. Employers should inform their staff about whether their FSA plan includes this carryover feature and provide current balance information, encouraging employees to utilize remaining funds if a carryover isn’t available.
The FSA use-it-or-lose-it rule can be very confusing and frustrating for employees. Again, putting real management emphasis on a quality benefits communication program is important.
Complete FSA and Section 125 Nondiscrimination Testing
FSAs must meet nondiscrimination testing requirements under Section 125 to avoid potential penalties.
This involves ensuring that the plan does not favor highly compensated employees over others. Employers should work with their benefits administrator to confirm that FSAs remain compliant as of year-end.
Section 125 Non-discrimination Requirements
Employees are classified as “highly compensated” if they meet any of these criteria:
- They hold an officer position within the company;
- They own 5% or more of the company’s shares;
- They earn an annual salary that exceeds the limit specified in Sec. 414(q)(1)(B),which is $155,000 as of 2025.
- Fall within the top 20% of earners in the company, should the employer choose this classification as per Sec. 414(q)(3).
Employees are considered “key employees” if they meet the following criteria:
- For the plan year 2025, officers receiving compensation according to Sec. 416(i)(1) amounting to $215,000 for the 2023 plan year are considered key employees.
- Individuals owning 1% of the company with annual earnings of $150,000 (not indexed) or more for the plan year; or
- Those owning 5% of the company or earned, no matter what they earned last year.
17.) Complete FSA and Section 125 Documentation Requirements
Section 125 cafeteria plan sponsors must establish detailed written documentation for their plans.
Required documents include:
- A comprehensive plan document
- A summary document for employees
These documents must precisely define the fiscal period of the plan. Any alterations to this period must be justified by legitimate business reasons, such as synchronizing with the fiscal year of the healthcare provider. They cannot be arbitrary and only for the convenience of the employer.
The summary plan document must be distributed to all eligible employees within 90 days of their enrollment.
18.) Comply With Qualified Small Employer Health Reimbursement Arrangement (QSEHRA) Requirements
QSERAs offer a unique solution for smaller businesses to assist with healthcare costs without having to provide a full group health plan.
However, they come with compliance requirements that must be met to remain in good standing with the IRS.
2025 QSEHRA Contribution Limits
For the year 2025, QSEHRAs allow for a maximum reimbursement of:
- Single coverage: $5,850
- Family coverage: $11,800
Employers should review these limits and confirm their QSEHRA plan complies with the current year’s restrictions. Failure to adhere to these limits could result in significant tax penalties.
19.) Annual Notice and Documentation Requirements
All QSEHRA plans require proper documentation and reporting.
Employers should provide an annual eligibility notice to employees explaining how reimbursements will affect personal taxes.
20.) Claim the Small Business Health Care Tax Credit
If you have 25 employees or fewer and you have recently started a group health insurance plan, you may be able to claim a valuable tax credit.
The credit is particularly valuable for companies with fewer than 25 employees.
To claim the Small Business Health Care Tax Credit, follow these steps:
- Determine Your Eligibility
- Employee Count: Ensure your business has fewer than 25 full-time equivalent (FTE) employees.
- Average Wages: Confirm that the average annual wages of your employees are less than $56,000 per FTE.
- Premium Contribution: Verify that your business pays at least 50% of the health insurance premiums for your employees.
- SHOP Enrollment: Enroll your employees in a qualified health plan through the Small Business Health Options Program (SHOP) Marketplace.
HealthCare.gov
- Calculate the Credit
- Use IRS Form 8941, “Credit for Small Employer Health Insurance Premiums,” to compute the credit amount. This form guides you through determining the number of FTEs, average wages, and the total premiums paid.
- File the Appropriate Tax Return
- For-profit Employers: Attach the completed Form 8941 to your annual income tax return (e.g., Form 1120 for corporations or Form 1065 for partnerships).
- Tax-exempt Employers: File Form 990-T, “Exempt Organization Business Income Tax Return,” even if you don’t typically file this form, and attach Form 8941.
- Adhere to Filing Deadlines
- Submit your tax return, including Form 8941, by the standard due date for your business type. For calendar-year corporations, this is typically March 15 of the following year; for sole proprietors, it’s April 15. If you require more time, consider filing for an extension using the appropriate IRS form.
21.) ERISA Compliance for Employer Health Plans
The Employee Retirement Income Security Act (ERISA) applies to most employer-sponsored health plans, imposing strict requirements on plan documentation and employee communication.
Document Maintenance and Summary Plan Descriptions (SPDs)
Employers must provide SPDs to new employees within 90 days of plan enrollment and distribute updated documents whenever significant changes occur.
File Form 5500
If you have 100 participants or more in your ERISA plan, you must file Form 5500 each year. Smaller plans may be exempt, but all companies should maintain accurate documentation.
22.) Check your COBRA Compliance and Notice Practices
Businesses with 20 or more employees must comply with COBRA regulations, which grant employees the option to continue their health coverage after leaving the company.
Updated COBRA Premium Rates for 2025
Each year, COBRA premiums must be updated to reflect the actual cost of coverage. Employers should work with their benefits administrator to ensure employees are notified of any rate changes promptly.
Timely Provision of COBRA Notices
COBRA notices must be provided within 14 days of an employee’s separation from the company, detailing options for continuing their coverage. Failure to comply with COBRA’s notice requirements can result in hefty fines.
23). Check Your Employee Wellness Programs For Mental Health Parity Compliance
Employers offering wellness programs should be aware of ADA, GINA, and HIPAA regulations.
Any wellness incentives or penalties must meet legal guidelines to avoid discrimination claims or privacy concerns.
If your business provides mental health or telehealth benefits, it’s essential to comply with the Mental Health Parity and Addiction Equity Act (MHPAEA). Telehealth benefits, if available, must provide equal access to mental health services as they do for physical health services. Employers should review these benefits with a compliance expert to ensure parity.
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Employee Benefits Compliance Checklist Summary
As the year wraps up, taking a proactive approach to health plan compliance is essential to position your business for a successful 2025.
With updated contribution limits, filing requirements, and annual notices, business owners have a full plate of tasks to ensure they remain compliant while maximizing employee benefits.
Partnering with a Personal Benefits Manager can simplify the process, providing expert guidance that mitigates compliance risks, improves employee satisfaction, and lets you focus on core business objectives. Schedule a free consultation to unlock your benefits potential and start the new year with confidence.
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Hi! I’m Mike Montes, and I’m one of your Personal Benefits Managers. I like working with HSA for America because we’re creating solutions to healthcare problems. Our focus on money-saving alternatives like HSA plans and health sharing programs, and the variety of health share programs we offer, are what set us apart. Read more about me on my Bio page.